Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pkd1l3Q2EG98 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pkd1l3Q2EG98 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pkd1l3Q2EG98 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pkd1l3Q2EG98 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18■□□□□ 0.47
Pkd1l3Q2EG98 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pkd1l3Q2EG98 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pkd1l3Q2EG98 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pkd1l3Q2EG98 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pkd1l3Q2EG98 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pkd1l3Q2EG98 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pkd1l3Q2EG98 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pkd1l3Q2EG98 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Gm43060-201ENSMUST00000200621 289 ntBASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pkd1l3Q2EG98 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pkd1l3Q2EG98 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pkd1l3Q2EG98 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1l3Q2EG98 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pkd1l3Q2EG98 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.93■□□□□ 0.46
Pkd1l3Q2EG98 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pkd1l3Q2EG98 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pkd1l3Q2EG98 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pkd1l3Q2EG98 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pkd1l3Q2EG98 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pkd1l3Q2EG98 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pkd1l3Q2EG98 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pkd1l3Q2EG98 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.92■□□□□ 0.46
Pkd1l3Q2EG98 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pkd1l3Q2EG98 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pkd1l3Q2EG98 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Gm10849-201ENSMUST00000100397 618 ntBASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pkd1l3Q2EG98 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Gm10033-202ENSMUST00000211874 928 ntBASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Pkd1l3Q2EG98 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pkd1l3Q2EG98 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pkd1l3Q2EG98 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pkd1l3Q2EG98 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1l3Q2EG98 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms