Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca2P97929 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca2P97929 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.65■□□□□ 0.74
Brca2P97929 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.65■□□□□ 0.74
Brca2P97929 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.65■□□□□ 0.74
Brca2P97929 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca2P97929 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Brca2P97929 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Brca2P97929 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Brca2P97929 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca2P97929 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca2P97929 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Brca2P97929 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.64■□□□□ 0.73
Brca2P97929 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.64■□□□□ 0.73
Brca2P97929 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca2P97929 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca2P97929 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Brca2P97929 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.63■□□□□ 0.73
Brca2P97929 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.63■□□□□ 0.73
Brca2P97929 Gm8520-201ENSMUST00000186517 868 ntBASIC19.63■□□□□ 0.73
Brca2P97929 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Brca2P97929 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Brca2P97929 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Brca2P97929 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Brca2P97929 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca2P97929 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brca2P97929 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca2P97929 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca2P97929 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brca2P97929 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.62■□□□□ 0.73
Brca2P97929 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca2P97929 Mir5133-201ENSMUST00000174955 77 ntBASIC19.61■□□□□ 0.73
Brca2P97929 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.61■□□□□ 0.73
Brca2P97929 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.61■□□□□ 0.73
Brca2P97929 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.61■□□□□ 0.73
Brca2P97929 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Gm13234-201ENSMUST00000120010 747 ntBASIC19.61■□□□□ 0.73
Brca2P97929 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.61■□□□□ 0.73
Brca2P97929 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Brca2P97929 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brca2P97929 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brca2P97929 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca2P97929 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca2P97929 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.6■□□□□ 0.73
Brca2P97929 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Brca2P97929 Gm13168-201ENSMUST00000121771 632 ntBASIC19.6■□□□□ 0.73
Brca2P97929 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.6■□□□□ 0.73
Brca2P97929 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brca2P97929 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.59■□□□□ 0.73
Brca2P97929 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca2P97929 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca2P97929 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Brca2P97929 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.59■□□□□ 0.73
Brca2P97929 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Brca2P97929 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca2P97929 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brca2P97929 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.59■□□□□ 0.73
Brca2P97929 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.59■□□□□ 0.73
Brca2P97929 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brca2P97929 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Brca2P97929 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca2P97929 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca2P97929 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brca2P97929 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Gm37856-201ENSMUST00000191634 999 ntBASIC19.57■□□□□ 0.72
Brca2P97929 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.57■□□□□ 0.72
Brca2P97929 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.57■□□□□ 0.72
Brca2P97929 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brca2P97929 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms