Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad5P97454 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Smad5P97454 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad5P97454 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.89■□□□□ 0.61
Smad5P97454 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad5P97454 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smad5P97454 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.89■□□□□ 0.61
Smad5P97454 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Smad5P97454 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Smad5P97454 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Smad5P97454 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.88■□□□□ 0.61
Smad5P97454 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.88■□□□□ 0.61
Smad5P97454 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smad5P97454 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.87■□□□□ 0.61
Smad5P97454 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.87■□□□□ 0.61
Smad5P97454 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.87■□□□□ 0.61
Smad5P97454 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Mir7075-201ENSMUST00000184187 82 ntBASIC18.87■□□□□ 0.61
Smad5P97454 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.87■□□□□ 0.61
Smad5P97454 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smad5P97454 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Smad5P97454 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad5P97454 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad5P97454 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smad5P97454 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smad5P97454 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smad5P97454 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.86■□□□□ 0.61
Smad5P97454 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad5P97454 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smad5P97454 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad5P97454 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad5P97454 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smad5P97454 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smad5P97454 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Smad5P97454 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Smad5P97454 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.85■□□□□ 0.61
Smad5P97454 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smad5P97454 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smad5P97454 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smad5P97454 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smad5P97454 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.84■□□□□ 0.61
Smad5P97454 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad5P97454 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Smad5P97454 Gm7143-201ENSMUST00000222811 859 ntBASIC18.84■□□□□ 0.61
Smad5P97454 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smad5P97454 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smad5P97454 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.84■□□□□ 0.61
Smad5P97454 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Smad5P97454 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad5P97454 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smad5P97454 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad5P97454 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smad5P97454 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad5P97454 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.83■□□□□ 0.6
Smad5P97454 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smad5P97454 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Smad5P97454 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.83■□□□□ 0.6
Smad5P97454 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Smad5P97454 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.83■□□□□ 0.6
Smad5P97454 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smad5P97454 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad5P97454 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smad5P97454 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smad5P97454 Notumos-201ENSMUST00000151998 2659 ntBASIC18.83■□□□□ 0.6
Smad5P97454 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms