Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps45P97390 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.68■□□□□ 0.9
Vps45P97390 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps45P97390 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vps45P97390 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Vps45P97390 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.68■□□□□ 0.9
Vps45P97390 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps45P97390 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.67■□□□□ 0.9
Vps45P97390 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps45P97390 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vps45P97390 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.67■□□□□ 0.9
Vps45P97390 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Vps45P97390 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps45P97390 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps45P97390 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps45P97390 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps45P97390 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vps45P97390 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps45P97390 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vps45P97390 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps45P97390 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps45P97390 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps45P97390 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.66■□□□□ 0.9
Vps45P97390 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vps45P97390 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps45P97390 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Vps45P97390 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps45P97390 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Vps45P97390 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps45P97390 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps45P97390 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.64■□□□□ 0.89
Vps45P97390 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps45P97390 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps45P97390 Gm29257-201ENSMUST00000186115 639 ntBASIC20.64■□□□□ 0.89
Vps45P97390 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Vps45P97390 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.64■□□□□ 0.89
Vps45P97390 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps45P97390 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Vps45P97390 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps45P97390 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps45P97390 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps45P97390 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vps45P97390 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.63■□□□□ 0.89
Vps45P97390 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.63■□□□□ 0.89
Vps45P97390 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vps45P97390 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.63■□□□□ 0.89
Vps45P97390 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Vps45P97390 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps45P97390 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps45P97390 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps45P97390 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps45P97390 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps45P97390 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps45P97390 Gm43530-201ENSMUST00000195920 274 ntBASIC20.62■□□□□ 0.89
Vps45P97390 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps45P97390 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps45P97390 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Vps45P97390 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.61■□□□□ 0.89
Vps45P97390 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms