Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.08□□□□□ -0.16
PrkdcP97313 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PrkdcP97313 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PrkdcP97313 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PrkdcP97313 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.08□□□□□ -0.16
PrkdcP97313 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.08□□□□□ -0.16
PrkdcP97313 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PrkdcP97313 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PrkdcP97313 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkdcP97313 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkdcP97313 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PrkdcP97313 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PrkdcP97313 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PrkdcP97313 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.07□□□□□ -0.16
PrkdcP97313 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PrkdcP97313 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PrkdcP97313 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.06□□□□□ -0.16
PrkdcP97313 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PrkdcP97313 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.06□□□□□ -0.16
PrkdcP97313 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkdcP97313 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.06□□□□□ -0.16
PrkdcP97313 Trmt13-210ENSMUST00000198454 880 ntBASIC14.06□□□□□ -0.16
PrkdcP97313 Gm10819-201ENSMUST00000099988 561 ntBASIC14.06□□□□□ -0.16
PrkdcP97313 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PrkdcP97313 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PrkdcP97313 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.05□□□□□ -0.16
PrkdcP97313 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC14.05□□□□□ -0.16
PrkdcP97313 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PrkdcP97313 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.05□□□□□ -0.16
PrkdcP97313 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrkdcP97313 Gm27275-201ENSMUST00000184318 272 ntBASIC14.05□□□□□ -0.16
PrkdcP97313 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.04□□□□□ -0.16
PrkdcP97313 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.04□□□□□ -0.16
PrkdcP97313 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
PrkdcP97313 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.04□□□□□ -0.16
PrkdcP97313 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.04□□□□□ -0.16
PrkdcP97313 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PrkdcP97313 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PrkdcP97313 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrkdcP97313 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkdcP97313 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkdcP97313 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkdcP97313 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkdcP97313 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PrkdcP97313 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkdcP97313 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrkdcP97313 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.03□□□□□ -0.16
PrkdcP97313 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.03□□□□□ -0.16
PrkdcP97313 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrkdcP97313 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrkdcP97313 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrkdcP97313 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrkdcP97313 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrkdcP97313 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrkdcP97313 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrkdcP97313 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PrkdcP97313 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrkdcP97313 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PrkdcP97313 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.02□□□□□ -0.17
PrkdcP97313 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrkdcP97313 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrkdcP97313 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrkdcP97313 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrkdcP97313 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrkdcP97313 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.01□□□□□ -0.17
PrkdcP97313 Gm7290-201ENSMUST00000104990 617 ntBASIC14.01□□□□□ -0.17
PrkdcP97313 Gm12918-201ENSMUST00000120234 636 ntBASIC14.01□□□□□ -0.17
PrkdcP97313 Gm15710-201ENSMUST00000121821 636 ntBASIC14.01□□□□□ -0.17
PrkdcP97313 Gm5075-201ENSMUST00000196916 622 ntBASIC14.01□□□□□ -0.17
PrkdcP97313 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.01□□□□□ -0.17
PrkdcP97313 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.01□□□□□ -0.17
PrkdcP97313 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.01□□□□□ -0.17
PrkdcP97313 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrkdcP97313 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14□□□□□ -0.17
PrkdcP97313 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PrkdcP97313 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14□□□□□ -0.17
PrkdcP97313 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14□□□□□ -0.17
PrkdcP97313 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14□□□□□ -0.17
PrkdcP97313 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms