Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Traf6P70196 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Traf6P70196 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Traf6P70196 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.67■□□□□ 0.74
Traf6P70196 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.67■□□□□ 0.74
Traf6P70196 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Traf6P70196 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Traf6P70196 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Traf6P70196 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.66■□□□□ 0.74
Traf6P70196 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.66■□□□□ 0.74
Traf6P70196 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.66■□□□□ 0.74
Traf6P70196 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Traf6P70196 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Traf6P70196 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Traf6P70196 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Traf6P70196 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.65■□□□□ 0.74
Traf6P70196 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.65■□□□□ 0.74
Traf6P70196 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Traf6P70196 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.65■□□□□ 0.74
Traf6P70196 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Traf6P70196 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Traf6P70196 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Traf6P70196 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.64■□□□□ 0.73
Traf6P70196 Gm40881-201ENSMUST00000223397 166 ntBASIC19.64■□□□□ 0.73
Traf6P70196 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Traf6P70196 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Traf6P70196 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Traf6P70196 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.64■□□□□ 0.73
Traf6P70196 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Traf6P70196 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.63■□□□□ 0.73
Traf6P70196 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Traf6P70196 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.62■□□□□ 0.73
Traf6P70196 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Traf6P70196 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.62■□□□□ 0.73
Traf6P70196 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.62■□□□□ 0.73
Traf6P70196 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.62■□□□□ 0.73
Traf6P70196 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Traf6P70196 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Traf6P70196 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Traf6P70196 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Traf6P70196 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.61■□□□□ 0.73
Traf6P70196 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Traf6P70196 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Traf6P70196 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Traf6P70196 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Traf6P70196 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Traf6P70196 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Traf6P70196 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.6■□□□□ 0.73
Traf6P70196 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Traf6P70196 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Traf6P70196 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Traf6P70196 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Traf6P70196 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Traf6P70196 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.59■□□□□ 0.73
Traf6P70196 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Traf6P70196 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Traf6P70196 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Traf6P70196 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Traf6P70196 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.58■□□□□ 0.73
Traf6P70196 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.58■□□□□ 0.72
Traf6P70196 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Traf6P70196 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Traf6P70196 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Traf6P70196 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms