Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Crnkl1P63154 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.67■□□□□ 0.74
Crnkl1P63154 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.67■□□□□ 0.74
Crnkl1P63154 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.67■□□□□ 0.74
Crnkl1P63154 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crnkl1P63154 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Crnkl1P63154 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Crnkl1P63154 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crnkl1P63154 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Crnkl1P63154 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Crnkl1P63154 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.65■□□□□ 0.74
Crnkl1P63154 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Crnkl1P63154 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Crnkl1P63154 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Crnkl1P63154 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Crnkl1P63154 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Crnkl1P63154 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Crnkl1P63154 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Crnkl1P63154 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Crnkl1P63154 Gm5921-201ENSMUST00000075898 882 ntBASIC19.64■□□□□ 0.73
Crnkl1P63154 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Crnkl1P63154 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Crnkl1P63154 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.63■□□□□ 0.73
Crnkl1P63154 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.63■□□□□ 0.73
Crnkl1P63154 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Crnkl1P63154 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.63■□□□□ 0.73
Crnkl1P63154 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crnkl1P63154 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.62■□□□□ 0.73
Crnkl1P63154 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Crnkl1P63154 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Crnkl1P63154 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Crnkl1P63154 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Crnkl1P63154 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Crnkl1P63154 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.61■□□□□ 0.73
Crnkl1P63154 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Crnkl1P63154 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Crnkl1P63154 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.61■□□□□ 0.73
Crnkl1P63154 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.61■□□□□ 0.73
Crnkl1P63154 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.6■□□□□ 0.73
Crnkl1P63154 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Crnkl1P63154 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Crnkl1P63154 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Crnkl1P63154 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Crnkl1P63154 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.59■□□□□ 0.73
Crnkl1P63154 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Crnkl1P63154 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Crnkl1P63154 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.59■□□□□ 0.73
Crnkl1P63154 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.59■□□□□ 0.73
Crnkl1P63154 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Crnkl1P63154 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.58■□□□□ 0.72
Crnkl1P63154 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.58■□□□□ 0.72
Crnkl1P63154 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms