Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp46P62069 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp46P62069 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp46P62069 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Usp46P62069 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.92■□□□□ 0.94
Usp46P62069 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp46P62069 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Usp46P62069 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Usp46P62069 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp46P62069 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp46P62069 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Usp46P62069 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp46P62069 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp46P62069 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp46P62069 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Usp46P62069 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp46P62069 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp46P62069 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp46P62069 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp46P62069 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.9■□□□□ 0.94
Usp46P62069 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Usp46P62069 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp46P62069 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.9■□□□□ 0.94
Usp46P62069 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.9■□□□□ 0.94
Usp46P62069 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.9■□□□□ 0.94
Usp46P62069 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp46P62069 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Usp46P62069 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.9■□□□□ 0.94
Usp46P62069 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp46P62069 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp46P62069 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp46P62069 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp46P62069 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp46P62069 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp46P62069 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp46P62069 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp46P62069 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.89■□□□□ 0.93
Usp46P62069 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Usp46P62069 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp46P62069 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp46P62069 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.89■□□□□ 0.93
Usp46P62069 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp46P62069 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.89■□□□□ 0.93
Usp46P62069 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp46P62069 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp46P62069 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.88■□□□□ 0.93
Usp46P62069 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp46P62069 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp46P62069 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp46P62069 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Usp46P62069 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp46P62069 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp46P62069 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.87■□□□□ 0.93
Usp46P62069 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp46P62069 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp46P62069 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp46P62069 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp46P62069 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp46P62069 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp46P62069 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Usp46P62069 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp46P62069 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Usp46P62069 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp46P62069 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp46P62069 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp46P62069 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp46P62069 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp46P62069 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.85■□□□□ 0.93
Usp46P62069 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp46P62069 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Usp46P62069 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Usp46P62069 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp46P62069 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp46P62069 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Usp46P62069 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Usp46P62069 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp46P62069 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp46P62069 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp46P62069 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms