Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a1P61620 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Sec61a1P61620 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.48■□□□□ 0.39
Sec61a1P61620 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a1P61620 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.48■□□□□ 0.39
Sec61a1P61620 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
Sec61a1P61620 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a1P61620 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.47■□□□□ 0.39
Sec61a1P61620 Gm7417-201ENSMUST00000192950 473 ntBASIC17.47■□□□□ 0.39
Sec61a1P61620 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.47■□□□□ 0.39
Sec61a1P61620 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.47■□□□□ 0.39
Sec61a1P61620 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sec61a1P61620 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sec61a1P61620 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a1P61620 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a1P61620 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a1P61620 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.46■□□□□ 0.39
Sec61a1P61620 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a1P61620 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.46■□□□□ 0.39
Sec61a1P61620 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sec61a1P61620 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a1P61620 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sec61a1P61620 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Sec61a1P61620 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sec61a1P61620 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Sec61a1P61620 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.45■□□□□ 0.38
Sec61a1P61620 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Gm40881-201ENSMUST00000223397 166 ntBASIC17.45■□□□□ 0.38
Sec61a1P61620 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.45■□□□□ 0.38
Sec61a1P61620 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a1P61620 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.45■□□□□ 0.38
Sec61a1P61620 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a1P61620 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a1P61620 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sec61a1P61620 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.44■□□□□ 0.38
Sec61a1P61620 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.44■□□□□ 0.38
Sec61a1P61620 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a1P61620 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a1P61620 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sec61a1P61620 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a1P61620 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.44■□□□□ 0.38
Sec61a1P61620 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.43■□□□□ 0.38
Sec61a1P61620 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.43■□□□□ 0.38
Sec61a1P61620 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sec61a1P61620 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a1P61620 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.43■□□□□ 0.38
Sec61a1P61620 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.42■□□□□ 0.38
Sec61a1P61620 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.42■□□□□ 0.38
Sec61a1P61620 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Sec61a1P61620 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sec61a1P61620 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a1P61620 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.41■□□□□ 0.38
Sec61a1P61620 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a1P61620 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a1P61620 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.41■□□□□ 0.38
Sec61a1P61620 Gm10399-202ENSMUST00000202768 748 ntBASIC17.41■□□□□ 0.38
Sec61a1P61620 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.41■□□□□ 0.38
Sec61a1P61620 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms