Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.76■■□□□ 1.55
Tm6sf1P58749 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Tm6sf1P58749 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tm6sf1P58749 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.75■■□□□ 1.55
Tm6sf1P58749 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Tm6sf1P58749 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Tm6sf1P58749 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tm6sf1P58749 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Tm6sf1P58749 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tm6sf1P58749 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tm6sf1P58749 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.73■■□□□ 1.55
Tm6sf1P58749 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tm6sf1P58749 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tm6sf1P58749 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Tm6sf1P58749 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Tm6sf1P58749 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.72■■□□□ 1.55
Tm6sf1P58749 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.72■■□□□ 1.55
Tm6sf1P58749 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.72■■□□□ 1.55
Tm6sf1P58749 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tm6sf1P58749 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Tm6sf1P58749 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.71■■□□□ 1.55
Tm6sf1P58749 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Tm6sf1P58749 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Tm6sf1P58749 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.7■■□□□ 1.54
Tm6sf1P58749 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tm6sf1P58749 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tm6sf1P58749 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Tm6sf1P58749 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tm6sf1P58749 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tm6sf1P58749 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Tm6sf1P58749 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tm6sf1P58749 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Tm6sf1P58749 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
Tm6sf1P58749 Gm34220-201ENSMUST00000223001 2709 ntBASIC24.68■■□□□ 1.54
Tm6sf1P58749 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Tm6sf1P58749 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Tm6sf1P58749 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.66■■□□□ 1.54
Tm6sf1P58749 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tm6sf1P58749 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tm6sf1P58749 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tm6sf1P58749 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tm6sf1P58749 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tm6sf1P58749 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tm6sf1P58749 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms