Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Lhx4P53776 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx4P53776 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx4P53776 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx4P53776 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx4P53776 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx4P53776 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx4P53776 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.82■□□□□ 0.28
Lhx4P53776 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx4P53776 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx4P53776 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx4P53776 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.82■□□□□ 0.28
Lhx4P53776 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.82■□□□□ 0.28
Lhx4P53776 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.82■□□□□ 0.28
Lhx4P53776 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx4P53776 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx4P53776 Iqck-206ENSMUST00000208658 2891 ntBASIC16.82■□□□□ 0.28
Lhx4P53776 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lhx4P53776 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx4P53776 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lhx4P53776 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lhx4P53776 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lhx4P53776 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx4P53776 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx4P53776 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lhx4P53776 Gm12922-201ENSMUST00000120626 809 ntBASIC16.8■□□□□ 0.28
Lhx4P53776 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.8■□□□□ 0.28
Lhx4P53776 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx4P53776 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx4P53776 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx4P53776 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx4P53776 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lhx4P53776 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx4P53776 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx4P53776 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lhx4P53776 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.79■□□□□ 0.28
Lhx4P53776 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.79■□□□□ 0.28
Lhx4P53776 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx4P53776 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lhx4P53776 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.79■□□□□ 0.28
Lhx4P53776 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.79■□□□□ 0.28
Lhx4P53776 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lhx4P53776 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lhx4P53776 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx4P53776 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lhx4P53776 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx4P53776 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Lhx4P53776 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lhx4P53776 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx4P53776 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx4P53776 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lhx4P53776 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lhx4P53776 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx4P53776 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx4P53776 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lhx4P53776 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.77■□□□□ 0.28
Lhx4P53776 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx4P53776 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx4P53776 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.77■□□□□ 0.27
Lhx4P53776 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.77■□□□□ 0.27
Lhx4P53776 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx4P53776 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.76■□□□□ 0.27
Lhx4P53776 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lhx4P53776 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lhx4P53776 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.76■□□□□ 0.27
Lhx4P53776 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx4P53776 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.76■□□□□ 0.27
Lhx4P53776 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lhx4P53776 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lhx4P53776 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Lhx4P53776 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lhx4P53776 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Gm15039-201ENSMUST00000118914 875 ntBASIC16.75■□□□□ 0.27
Lhx4P53776 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.75■□□□□ 0.27
Lhx4P53776 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms