Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CcnfP51944 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CcnfP51944 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CcnfP51944 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CcnfP51944 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CcnfP51944 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CcnfP51944 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CcnfP51944 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CcnfP51944 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CcnfP51944 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CcnfP51944 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CcnfP51944 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.08■□□□□ 0.64
CcnfP51944 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CcnfP51944 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CcnfP51944 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CcnfP51944 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CcnfP51944 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.08■□□□□ 0.64
CcnfP51944 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CcnfP51944 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcnfP51944 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcnfP51944 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcnfP51944 Gm10420-201ENSMUST00000121713 882 ntBASIC19.07■□□□□ 0.64
CcnfP51944 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.07■□□□□ 0.64
CcnfP51944 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.07■□□□□ 0.64
CcnfP51944 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcnfP51944 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcnfP51944 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.06■□□□□ 0.64
CcnfP51944 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CcnfP51944 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CcnfP51944 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.06■□□□□ 0.64
CcnfP51944 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcnfP51944 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcnfP51944 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcnfP51944 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcnfP51944 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CcnfP51944 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CcnfP51944 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CcnfP51944 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CcnfP51944 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CcnfP51944 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcnfP51944 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CcnfP51944 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
CcnfP51944 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.04■□□□□ 0.64
CcnfP51944 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CcnfP51944 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcnfP51944 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CcnfP51944 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CcnfP51944 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcnfP51944 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcnfP51944 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcnfP51944 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CcnfP51944 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcnfP51944 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcnfP51944 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CcnfP51944 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CcnfP51944 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CcnfP51944 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CcnfP51944 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CcnfP51944 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CcnfP51944 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CcnfP51944 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CcnfP51944 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.01■□□□□ 0.63
CcnfP51944 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnfP51944 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
CcnfP51944 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19■□□□□ 0.63
CcnfP51944 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19■□□□□ 0.63
CcnfP51944 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcnfP51944 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcnfP51944 Gm11175-201ENSMUST00000116172 543 ntBASIC19■□□□□ 0.63
CcnfP51944 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19■□□□□ 0.63
CcnfP51944 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcnfP51944 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CcnfP51944 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CcnfP51944 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CcnfP51944 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CcnfP51944 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CcnfP51944 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CcnfP51944 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms