Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rfx2P48379 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rfx2P48379 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.92■□□□□ 0.94
Rfx2P48379 Gm8493-201ENSMUST00000196881 489 ntBASIC20.92■□□□□ 0.94
Rfx2P48379 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.92■□□□□ 0.94
Rfx2P48379 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.92■□□□□ 0.94
Rfx2P48379 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx2P48379 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rfx2P48379 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Rfx2P48379 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.91■□□□□ 0.94
Rfx2P48379 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rfx2P48379 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx2P48379 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.91■□□□□ 0.94
Rfx2P48379 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx2P48379 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx2P48379 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx2P48379 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx2P48379 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rfx2P48379 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx2P48379 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rfx2P48379 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx2P48379 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rfx2P48379 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rfx2P48379 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Rfx2P48379 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx2P48379 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.9■□□□□ 0.94
Rfx2P48379 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.9■□□□□ 0.94
Rfx2P48379 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx2P48379 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx2P48379 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx2P48379 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Rfx2P48379 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx2P48379 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx2P48379 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx2P48379 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.89■□□□□ 0.93
Rfx2P48379 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rfx2P48379 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx2P48379 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rfx2P48379 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx2P48379 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx2P48379 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rfx2P48379 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx2P48379 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx2P48379 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.88■□□□□ 0.93
Rfx2P48379 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx2P48379 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx2P48379 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx2P48379 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx2P48379 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rfx2P48379 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.88■□□□□ 0.93
Rfx2P48379 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Golph3-202ENSMUST00000226517 2359 ntBASIC20.87■□□□□ 0.93
Rfx2P48379 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.87■□□□□ 0.93
Rfx2P48379 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx2P48379 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx2P48379 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx2P48379 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rfx2P48379 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rfx2P48379 Gm43017-201ENSMUST00000198296 752 ntBASIC20.86■□□□□ 0.93
Rfx2P48379 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx2P48379 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx2P48379 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rfx2P48379 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx2P48379 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rfx2P48379 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx2P48379 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rfx2P48379 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfx2P48379 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx2P48379 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Rfx2P48379 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx2P48379 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms