Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.61■□□□□ 0.89
Msh2P43247 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh2P43247 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh2P43247 Gm9959-201ENSMUST00000068277 390 ntBASIC20.61■□□□□ 0.89
Msh2P43247 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh2P43247 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Msh2P43247 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh2P43247 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Msh2P43247 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh2P43247 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.6■□□□□ 0.89
Msh2P43247 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.6■□□□□ 0.89
Msh2P43247 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.6■□□□□ 0.89
Msh2P43247 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Msh2P43247 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh2P43247 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Msh2P43247 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Msh2P43247 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Msh2P43247 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.59■□□□□ 0.89
Msh2P43247 Gm40881-201ENSMUST00000223397 166 ntBASIC20.59■□□□□ 0.89
Msh2P43247 Rps24-207ENSMUST00000224568 714 ntBASIC20.59■□□□□ 0.89
Msh2P43247 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.59■□□□□ 0.89
Msh2P43247 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh2P43247 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Msh2P43247 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh2P43247 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Msh2P43247 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh2P43247 Etf1-202ENSMUST00000180351 108 ntBASIC20.58■□□□□ 0.89
Msh2P43247 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.58■□□□□ 0.89
Msh2P43247 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Msh2P43247 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Msh2P43247 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh2P43247 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Msh2P43247 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh2P43247 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh2P43247 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.58■□□□□ 0.88
Msh2P43247 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Msh2P43247 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh2P43247 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh2P43247 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.57■□□□□ 0.88
Msh2P43247 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh2P43247 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Msh2P43247 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh2P43247 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Msh2P43247 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Msh2P43247 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.56■□□□□ 0.88
Msh2P43247 Gm45102-201ENSMUST00000207427 857 ntBASIC20.56■□□□□ 0.88
Msh2P43247 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh2P43247 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh2P43247 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh2P43247 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh2P43247 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Gm14117-201ENSMUST00000122417 843 ntBASIC20.55■□□□□ 0.88
Msh2P43247 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.55■□□□□ 0.88
Msh2P43247 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.55■□□□□ 0.88
Msh2P43247 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.55■□□□□ 0.88
Msh2P43247 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.55■□□□□ 0.88
Msh2P43247 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh2P43247 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.55■□□□□ 0.88
Msh2P43247 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh2P43247 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.54■□□□□ 0.88
Msh2P43247 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh2P43247 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh2P43247 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh2P43247 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh2P43247 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh2P43247 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.53■□□□□ 0.88
Msh2P43247 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Msh2P43247 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh2P43247 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh2P43247 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh2P43247 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh2P43247 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh2P43247 Gm7417-201ENSMUST00000192950 473 ntBASIC20.52■□□□□ 0.88
Msh2P43247 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh2P43247 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh2P43247 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Msh2P43247 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Msh2P43247 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Msh2P43247 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh2P43247 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Msh2P43247 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh2P43247 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Msh2P43247 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.51■□□□□ 0.87
Msh2P43247 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Msh2P43247 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Msh2P43247 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh2P43247 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Msh2P43247 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms