Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HttP42859 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HttP42859 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HttP42859 Gm5408-201ENSMUST00000197998 747 ntBASIC21.94■■□□□ 1.1
HttP42859 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.94■■□□□ 1.1
HttP42859 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HttP42859 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HttP42859 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HttP42859 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
HttP42859 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HttP42859 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HttP42859 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HttP42859 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.93■■□□□ 1.1
HttP42859 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HttP42859 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HttP42859 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
HttP42859 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HttP42859 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HttP42859 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HttP42859 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HttP42859 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HttP42859 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
HttP42859 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.92■■□□□ 1.1
HttP42859 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
HttP42859 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.92■■□□□ 1.1
HttP42859 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
HttP42859 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.91■■□□□ 1.1
HttP42859 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.91■■□□□ 1.1
HttP42859 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
HttP42859 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HttP42859 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HttP42859 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HttP42859 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.9■■□□□ 1.1
HttP42859 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HttP42859 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.9■■□□□ 1.1
HttP42859 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HttP42859 Trmt13-210ENSMUST00000198454 880 ntBASIC21.9■■□□□ 1.1
HttP42859 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.9■■□□□ 1.1
HttP42859 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.89■■□□□ 1.1
HttP42859 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HttP42859 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HttP42859 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HttP42859 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HttP42859 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.89■■□□□ 1.09
HttP42859 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HttP42859 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HttP42859 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.89■■□□□ 1.09
HttP42859 Gm26524-201ENSMUST00000192339 390 ntBASIC21.89■■□□□ 1.09
HttP42859 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.89■■□□□ 1.09
HttP42859 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HttP42859 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.88■■□□□ 1.09
HttP42859 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HttP42859 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HttP42859 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HttP42859 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HttP42859 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HttP42859 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HttP42859 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.87■■□□□ 1.09
HttP42859 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HttP42859 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HttP42859 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HttP42859 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HttP42859 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HttP42859 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HttP42859 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HttP42859 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HttP42859 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HttP42859 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HttP42859 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HttP42859 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HttP42859 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HttP42859 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HttP42859 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HttP42859 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.85■■□□□ 1.09
HttP42859 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HttP42859 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.84■■□□□ 1.09
HttP42859 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HttP42859 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HttP42859 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HttP42859 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HttP42859 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HttP42859 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
HttP42859 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.83■■□□□ 1.09
HttP42859 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HttP42859 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HttP42859 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HttP42859 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms