Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-2P42586 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx2-2P42586 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Gm9847-201ENSMUST00000052528 599 ntBASIC18.42■□□□□ 0.54
Nkx2-2P42586 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.42■□□□□ 0.54
Nkx2-2P42586 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nkx2-2P42586 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.41■□□□□ 0.54
Nkx2-2P42586 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-2P42586 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx2-2P42586 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx2-2P42586 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-2P42586 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-2P42586 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx2-2P42586 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nkx2-2P42586 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.37■□□□□ 0.53
Nkx2-2P42586 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-2P42586 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-2P42586 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx2-2P42586 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-2P42586 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-2P42586 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.36■□□□□ 0.53
Nkx2-2P42586 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-2P42586 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.36■□□□□ 0.53
Nkx2-2P42586 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-2P42586 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx2-2P42586 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.35■□□□□ 0.53
Nkx2-2P42586 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx2-2P42586 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-2P42586 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.34■□□□□ 0.53
Nkx2-2P42586 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms