Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf9P41274 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.16■□□□□ 0.66
Tnfsf9P41274 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf9P41274 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf9P41274 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf9P41274 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf9P41274 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf9P41274 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfsf9P41274 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfsf9P41274 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfsf9P41274 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tnfsf9P41274 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfsf9P41274 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.14■□□□□ 0.65
Tnfsf9P41274 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfsf9P41274 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.13■□□□□ 0.65
Tnfsf9P41274 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tnfsf9P41274 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Gm26833-201ENSMUST00000180899 440 ntBASIC19.12■□□□□ 0.65
Tnfsf9P41274 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf9P41274 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf9P41274 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.1■□□□□ 0.65
Tnfsf9P41274 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.09■□□□□ 0.65
Tnfsf9P41274 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf9P41274 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfsf9P41274 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.08■□□□□ 0.65
Tnfsf9P41274 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.08■□□□□ 0.65
Tnfsf9P41274 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Tnfsf9P41274 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfsf9P41274 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfsf9P41274 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfsf9P41274 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfsf9P41274 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.07■□□□□ 0.64
Tnfsf9P41274 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf9P41274 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms