Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 AV356131-201ENSMUST00000206201 750 ntBASIC16.54■□□□□ 0.24
Abca1P41233 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.54■□□□□ 0.24
Abca1P41233 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca1P41233 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.53■□□□□ 0.24
Abca1P41233 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.53■□□□□ 0.24
Abca1P41233 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca1P41233 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.53■□□□□ 0.24
Abca1P41233 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca1P41233 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca1P41233 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abca1P41233 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Abca1P41233 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca1P41233 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca1P41233 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Abca1P41233 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abca1P41233 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abca1P41233 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abca1P41233 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca1P41233 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.51■□□□□ 0.23
Abca1P41233 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca1P41233 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca1P41233 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Abca1P41233 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Abca1P41233 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abca1P41233 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Abca1P41233 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.5■□□□□ 0.23
Abca1P41233 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.5■□□□□ 0.23
Abca1P41233 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Abca1P41233 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Abca1P41233 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca1P41233 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Abca1P41233 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abca1P41233 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca1P41233 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Abca1P41233 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.49■□□□□ 0.23
Abca1P41233 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abca1P41233 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Abca1P41233 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
Abca1P41233 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abca1P41233 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca1P41233 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abca1P41233 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abca1P41233 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.48■□□□□ 0.23
Abca1P41233 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abca1P41233 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.47■□□□□ 0.23
Abca1P41233 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Abca1P41233 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.47■□□□□ 0.23
Abca1P41233 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abca1P41233 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.46■□□□□ 0.23
Abca1P41233 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.46■□□□□ 0.23
Abca1P41233 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.46■□□□□ 0.23
Abca1P41233 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.46■□□□□ 0.23
Abca1P41233 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abca1P41233 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Abca1P41233 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Abca1P41233 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abca1P41233 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Abca1P41233 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.45■□□□□ 0.22
Abca1P41233 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abca1P41233 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abca1P41233 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
Abca1P41233 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abca1P41233 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abca1P41233 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.44■□□□□ 0.22
Abca1P41233 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.44■□□□□ 0.22
Abca1P41233 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.44■□□□□ 0.22
Abca1P41233 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca1P41233 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms