Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HmgclP38060 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HmgclP38060 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HmgclP38060 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.78■□□□□ 0.76
HmgclP38060 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HmgclP38060 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HmgclP38060 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HmgclP38060 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HmgclP38060 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HmgclP38060 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HmgclP38060 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HmgclP38060 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HmgclP38060 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HmgclP38060 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HmgclP38060 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HmgclP38060 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HmgclP38060 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HmgclP38060 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HmgclP38060 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HmgclP38060 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HmgclP38060 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HmgclP38060 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HmgclP38060 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HmgclP38060 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
HmgclP38060 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
HmgclP38060 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HmgclP38060 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HmgclP38060 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
HmgclP38060 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HmgclP38060 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.74■□□□□ 0.75
HmgclP38060 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HmgclP38060 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HmgclP38060 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.73■□□□□ 0.75
HmgclP38060 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.73■□□□□ 0.75
HmgclP38060 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.73■□□□□ 0.75
HmgclP38060 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
HmgclP38060 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HmgclP38060 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HmgclP38060 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
HmgclP38060 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HmgclP38060 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HmgclP38060 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HmgclP38060 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HmgclP38060 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HmgclP38060 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.71■□□□□ 0.75
HmgclP38060 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.71■□□□□ 0.75
HmgclP38060 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.71■□□□□ 0.75
HmgclP38060 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HmgclP38060 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HmgclP38060 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HmgclP38060 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HmgclP38060 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HmgclP38060 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HmgclP38060 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.7■□□□□ 0.74
HmgclP38060 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HmgclP38060 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HmgclP38060 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.7■□□□□ 0.74
HmgclP38060 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HmgclP38060 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HmgclP38060 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HmgclP38060 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HmgclP38060 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.69■□□□□ 0.74
HmgclP38060 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.69■□□□□ 0.74
HmgclP38060 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
HmgclP38060 Gm13241-201ENSMUST00000094493 780 ntBASIC19.69■□□□□ 0.74
HmgclP38060 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms