Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sox5P35710 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sox5P35710 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox5P35710 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.91■■□□□ 1.1
Sox5P35710 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox5P35710 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox5P35710 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox5P35710 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Sox5P35710 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox5P35710 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.9■■□□□ 1.1
Sox5P35710 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Sox5P35710 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sox5P35710 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.89■■□□□ 1.1
Sox5P35710 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox5P35710 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox5P35710 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox5P35710 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox5P35710 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.89■■□□□ 1.09
Sox5P35710 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox5P35710 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Sox5P35710 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sox5P35710 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sox5P35710 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sox5P35710 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.88■■□□□ 1.09
Sox5P35710 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.88■■□□□ 1.09
Sox5P35710 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Sox5P35710 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sox5P35710 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.88■■□□□ 1.09
Sox5P35710 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox5P35710 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox5P35710 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Sox5P35710 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox5P35710 Gm7143-201ENSMUST00000222811 859 ntBASIC21.87■■□□□ 1.09
Sox5P35710 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox5P35710 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox5P35710 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.86■■□□□ 1.09
Sox5P35710 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Sox5P35710 Gm10232-201ENSMUST00000089221 720 ntBASIC21.86■■□□□ 1.09
Sox5P35710 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Sox5P35710 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox5P35710 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox5P35710 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox5P35710 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sox5P35710 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox5P35710 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox5P35710 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sox5P35710 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox5P35710 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox5P35710 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.84■■□□□ 1.09
Sox5P35710 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Sox5P35710 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox5P35710 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox5P35710 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox5P35710 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox5P35710 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox5P35710 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
Sox5P35710 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox5P35710 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.83■■□□□ 1.08
Sox5P35710 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sox5P35710 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox5P35710 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox5P35710 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox5P35710 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.82■■□□□ 1.08
Sox5P35710 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox5P35710 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox5P35710 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sox5P35710 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox5P35710 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox5P35710 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox5P35710 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Sox5P35710 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox5P35710 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox5P35710 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox5P35710 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox5P35710 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox5P35710 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Sox5P35710 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox5P35710 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox5P35710 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox5P35710 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sox5P35710 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms