Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.54■□□□□ 0.56
Foxa1P35582 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.54■□□□□ 0.56
Foxa1P35582 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Foxa1P35582 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa1P35582 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa1P35582 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Foxa1P35582 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa1P35582 Mir6236-201ENSMUST00000184437 123 ntBASIC18.53■□□□□ 0.56
Foxa1P35582 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Foxa1P35582 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa1P35582 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa1P35582 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Foxa1P35582 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Foxa1P35582 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.52■□□□□ 0.56
Foxa1P35582 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.52■□□□□ 0.56
Foxa1P35582 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.52■□□□□ 0.56
Foxa1P35582 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Foxa1P35582 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Foxa1P35582 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Foxa1P35582 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.52■□□□□ 0.55
Foxa1P35582 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa1P35582 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Foxa1P35582 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa1P35582 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.49■□□□□ 0.55
Foxa1P35582 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa1P35582 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Foxa1P35582 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Foxa1P35582 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Foxa1P35582 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Foxa1P35582 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxa1P35582 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Foxa1P35582 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.47■□□□□ 0.55
Foxa1P35582 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxa1P35582 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Foxa1P35582 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxa1P35582 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.46■□□□□ 0.55
Foxa1P35582 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.46■□□□□ 0.55
Foxa1P35582 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxa1P35582 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxa1P35582 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxa1P35582 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Foxa1P35582 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Foxa1P35582 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxa1P35582 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Foxa1P35582 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Foxa1P35582 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.44■□□□□ 0.54
Foxa1P35582 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Foxa1P35582 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms