Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thbs1P35441 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thbs1P35441 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thbs1P35441 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.51■□□□□ 0.55
Thbs1P35441 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Thbs1P35441 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Thbs1P35441 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.51■□□□□ 0.55
Thbs1P35441 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.51■□□□□ 0.55
Thbs1P35441 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.51■□□□□ 0.55
Thbs1P35441 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Thbs1P35441 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.51■□□□□ 0.55
Thbs1P35441 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thbs1P35441 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.51■□□□□ 0.55
Thbs1P35441 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thbs1P35441 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Thbs1P35441 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Thbs1P35441 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Mir6236-201ENSMUST00000184437 123 ntBASIC18.5■□□□□ 0.55
Thbs1P35441 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Thbs1P35441 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Thbs1P35441 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thbs1P35441 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thbs1P35441 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thbs1P35441 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.49■□□□□ 0.55
Thbs1P35441 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Thbs1P35441 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thbs1P35441 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thbs1P35441 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Thbs1P35441 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Thbs1P35441 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.48■□□□□ 0.55
Thbs1P35441 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Thbs1P35441 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Thbs1P35441 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Thbs1P35441 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Thbs1P35441 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Thbs1P35441 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Thbs1P35441 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.47■□□□□ 0.55
Thbs1P35441 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Thbs1P35441 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
Thbs1P35441 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Gm22238-201ENSMUST00000175222 88 ntBASIC18.46■□□□□ 0.55
Thbs1P35441 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Thbs1P35441 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Thbs1P35441 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.45■□□□□ 0.54
Thbs1P35441 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.45■□□□□ 0.54
Thbs1P35441 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.45■□□□□ 0.54
Thbs1P35441 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Thbs1P35441 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.45■□□□□ 0.54
Thbs1P35441 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Thbs1P35441 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Thbs1P35441 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Thbs1P35441 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.44■□□□□ 0.54
Thbs1P35441 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.44■□□□□ 0.54
Thbs1P35441 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.44■□□□□ 0.54
Thbs1P35441 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Thbs1P35441 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms