Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.31■□□□□ 0.2
Rab5cP35278 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.31■□□□□ 0.2
Rab5cP35278 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab5cP35278 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rab5cP35278 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab5cP35278 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.29■□□□□ 0.2
Rab5cP35278 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.29■□□□□ 0.2
Rab5cP35278 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rab5cP35278 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.29■□□□□ 0.2
Rab5cP35278 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rab5cP35278 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.29■□□□□ 0.2
Rab5cP35278 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rab5cP35278 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rab5cP35278 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rab5cP35278 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab5cP35278 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab5cP35278 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab5cP35278 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rab5cP35278 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rab5cP35278 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.28■□□□□ 0.2
Rab5cP35278 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab5cP35278 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.28■□□□□ 0.2
Rab5cP35278 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab5cP35278 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rab5cP35278 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rab5cP35278 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab5cP35278 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab5cP35278 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.27■□□□□ 0.2
Rab5cP35278 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Rab5cP35278 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab5cP35278 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab5cP35278 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab5cP35278 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.27■□□□□ 0.2
Rab5cP35278 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.27■□□□□ 0.2
Rab5cP35278 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rab5cP35278 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab5cP35278 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab5cP35278 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rab5cP35278 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab5cP35278 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rab5cP35278 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.26■□□□□ 0.19
Rab5cP35278 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab5cP35278 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Rab5cP35278 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Rab5cP35278 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Gm44428-201ENSMUST00000204474 874 ntBASIC16.25■□□□□ 0.19
Rab5cP35278 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab5cP35278 Gm45364-201ENSMUST00000210883 159 ntBASIC16.25■□□□□ 0.19
Rab5cP35278 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rab5cP35278 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rab5cP35278 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab5cP35278 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab5cP35278 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab5cP35278 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab5cP35278 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab5cP35278 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab5cP35278 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rab5cP35278 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab5cP35278 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rab5cP35278 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms