Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.38■□□□□ 0.85
Slc6a13P31649 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.38■□□□□ 0.85
Slc6a13P31649 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a13P31649 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a13P31649 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a13P31649 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc6a13P31649 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a13P31649 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a13P31649 Mir6236-201ENSMUST00000184437 123 ntBASIC20.37■□□□□ 0.85
Slc6a13P31649 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.37■□□□□ 0.85
Slc6a13P31649 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Slc6a13P31649 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slc6a13P31649 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.36■□□□□ 0.85
Slc6a13P31649 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.36■□□□□ 0.85
Slc6a13P31649 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slc6a13P31649 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a13P31649 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc6a13P31649 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Slc6a13P31649 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc6a13P31649 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a13P31649 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a13P31649 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a13P31649 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.34■□□□□ 0.85
Slc6a13P31649 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a13P31649 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a13P31649 Gm13241-201ENSMUST00000094493 780 ntBASIC20.34■□□□□ 0.85
Slc6a13P31649 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a13P31649 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a13P31649 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a13P31649 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a13P31649 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.33■□□□□ 0.85
Slc6a13P31649 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a13P31649 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Slc6a13P31649 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a13P31649 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.33■□□□□ 0.84
Slc6a13P31649 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
Slc6a13P31649 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a13P31649 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a13P31649 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Slc6a13P31649 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Slc6a13P31649 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc6a13P31649 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a13P31649 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc6a13P31649 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.31■□□□□ 0.84
Slc6a13P31649 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.31■□□□□ 0.84
Slc6a13P31649 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.31■□□□□ 0.84
Slc6a13P31649 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Slc6a13P31649 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Slc6a13P31649 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Slc6a13P31649 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a13P31649 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a13P31649 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.3■□□□□ 0.84
Slc6a13P31649 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a13P31649 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a13P31649 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a13P31649 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms