Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.04■□□□□ 0.96
H2afxP27661 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.04■□□□□ 0.96
H2afxP27661 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.04■□□□□ 0.96
H2afxP27661 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afxP27661 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
H2afxP27661 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afxP27661 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.03■□□□□ 0.96
H2afxP27661 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afxP27661 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afxP27661 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
H2afxP27661 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afxP27661 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afxP27661 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.02■□□□□ 0.96
H2afxP27661 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.02■□□□□ 0.96
H2afxP27661 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.02■□□□□ 0.96
H2afxP27661 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
H2afxP27661 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afxP27661 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
H2afxP27661 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
H2afxP27661 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.01■□□□□ 0.95
H2afxP27661 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.01■□□□□ 0.95
H2afxP27661 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
H2afxP27661 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H2afxP27661 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Grk6-206ENSMUST00000224995 2971 ntBASIC21■□□□□ 0.95
H2afxP27661 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afxP27661 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afxP27661 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.99■□□□□ 0.95
H2afxP27661 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afxP27661 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afxP27661 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afxP27661 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afxP27661 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
H2afxP27661 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afxP27661 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afxP27661 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.98■□□□□ 0.95
H2afxP27661 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afxP27661 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afxP27661 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
H2afxP27661 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afxP27661 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
H2afxP27661 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afxP27661 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.96■□□□□ 0.95
H2afxP27661 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
H2afxP27661 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afxP27661 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
H2afxP27661 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afxP27661 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
H2afxP27661 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afxP27661 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afxP27661 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
H2afxP27661 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.95■□□□□ 0.94
H2afxP27661 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afxP27661 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H2afxP27661 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms