Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nfkb1P25799 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.61■□□□□ 0.89
Nfkb1P25799 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.61■□□□□ 0.89
Nfkb1P25799 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nfkb1P25799 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nfkb1P25799 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nfkb1P25799 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.6■□□□□ 0.89
Nfkb1P25799 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nfkb1P25799 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nfkb1P25799 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nfkb1P25799 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nfkb1P25799 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nfkb1P25799 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nfkb1P25799 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nfkb1P25799 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nfkb1P25799 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.59■□□□□ 0.89
Nfkb1P25799 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nfkb1P25799 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nfkb1P25799 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.58■□□□□ 0.89
Nfkb1P25799 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.58■□□□□ 0.89
Nfkb1P25799 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
Nfkb1P25799 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nfkb1P25799 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nfkb1P25799 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nfkb1P25799 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nfkb1P25799 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Nfkb1P25799 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.57■□□□□ 0.88
Nfkb1P25799 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nfkb1P25799 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nfkb1P25799 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.56■□□□□ 0.88
Nfkb1P25799 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nfkb1P25799 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nfkb1P25799 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.55■□□□□ 0.88
Nfkb1P25799 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Gm40848-201ENSMUST00000221998 324 ntBASIC20.55■□□□□ 0.88
Nfkb1P25799 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nfkb1P25799 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nfkb1P25799 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 Mir6236-201ENSMUST00000184437 123 ntBASIC20.53■□□□□ 0.88
Nfkb1P25799 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nfkb1P25799 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Nfkb1P25799 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.53■□□□□ 0.88
Nfkb1P25799 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nfkb1P25799 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nfkb1P25799 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nfkb1P25799 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nfkb1P25799 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nfkb1P25799 Smad6-203ENSMUST00000179458 273 ntBASIC20.52■□□□□ 0.88
Nfkb1P25799 Gm43060-201ENSMUST00000200621 289 ntBASIC20.52■□□□□ 0.88
Nfkb1P25799 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.52■□□□□ 0.88
Nfkb1P25799 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nfkb1P25799 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nfkb1P25799 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nfkb1P25799 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.51■□□□□ 0.87
Nfkb1P25799 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.51■□□□□ 0.87
Nfkb1P25799 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nfkb1P25799 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nfkb1P25799 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nfkb1P25799 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nfkb1P25799 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nfkb1P25799 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nfkb1P25799 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nfkb1P25799 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nfkb1P25799 Gm5874-201ENSMUST00000096101 508 ntBASIC20.5■□□□□ 0.87
Nfkb1P25799 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms