Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
BdnfP21237 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BdnfP21237 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.13■□□□□ 0.65
BdnfP21237 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
BdnfP21237 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BdnfP21237 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BdnfP21237 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BdnfP21237 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BdnfP21237 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BdnfP21237 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.12■□□□□ 0.65
BdnfP21237 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BdnfP21237 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
BdnfP21237 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BdnfP21237 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.11■□□□□ 0.65
BdnfP21237 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
BdnfP21237 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.11■□□□□ 0.65
BdnfP21237 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BdnfP21237 Gm10232-201ENSMUST00000089221 720 ntBASIC19.11■□□□□ 0.65
BdnfP21237 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BdnfP21237 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BdnfP21237 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BdnfP21237 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BdnfP21237 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BdnfP21237 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BdnfP21237 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BdnfP21237 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
BdnfP21237 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BdnfP21237 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BdnfP21237 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BdnfP21237 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BdnfP21237 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
BdnfP21237 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
BdnfP21237 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BdnfP21237 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.08■□□□□ 0.65
BdnfP21237 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
BdnfP21237 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BdnfP21237 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
BdnfP21237 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BdnfP21237 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BdnfP21237 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BdnfP21237 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.08■□□□□ 0.64
BdnfP21237 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.08■□□□□ 0.64
BdnfP21237 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BdnfP21237 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BdnfP21237 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
BdnfP21237 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BdnfP21237 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BdnfP21237 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BdnfP21237 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
BdnfP21237 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BdnfP21237 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BdnfP21237 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.07■□□□□ 0.64
BdnfP21237 Gm10399-202ENSMUST00000202768 748 ntBASIC19.07■□□□□ 0.64
BdnfP21237 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BdnfP21237 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
BdnfP21237 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BdnfP21237 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BdnfP21237 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.06■□□□□ 0.64
BdnfP21237 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BdnfP21237 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BdnfP21237 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.06■□□□□ 0.64
BdnfP21237 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BdnfP21237 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BdnfP21237 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.05■□□□□ 0.64
BdnfP21237 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
BdnfP21237 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
BdnfP21237 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BdnfP21237 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BdnfP21237 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BdnfP21237 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.04■□□□□ 0.64
BdnfP21237 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BdnfP21237 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BdnfP21237 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms