Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rb1P13405 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.26■□□□□ 0.83
Rb1P13405 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.26■□□□□ 0.83
Rb1P13405 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rb1P13405 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rb1P13405 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rb1P13405 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rb1P13405 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rb1P13405 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Rb1P13405 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rb1P13405 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rb1P13405 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rb1P13405 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rb1P13405 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rb1P13405 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.25■□□□□ 0.83
Rb1P13405 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rb1P13405 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Rb1P13405 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Rb1P13405 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rb1P13405 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rb1P13405 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.23■□□□□ 0.83
Rb1P13405 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 Gm5874-201ENSMUST00000096101 508 ntBASIC20.23■□□□□ 0.83
Rb1P13405 Golph3-202ENSMUST00000226517 2359 ntBASIC20.23■□□□□ 0.83
Rb1P13405 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rb1P13405 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rb1P13405 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rb1P13405 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rb1P13405 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rb1P13405 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rb1P13405 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.22■□□□□ 0.83
Rb1P13405 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.22■□□□□ 0.83
Rb1P13405 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Rb1P13405 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rb1P13405 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rb1P13405 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Rb1P13405 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rb1P13405 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rb1P13405 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rb1P13405 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rb1P13405 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rb1P13405 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Rb1P13405 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Rb1P13405 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.2■□□□□ 0.82
Rb1P13405 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.2■□□□□ 0.82
Rb1P13405 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rb1P13405 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rb1P13405 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Rb1P13405 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rb1P13405 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rb1P13405 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
Rb1P13405 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
Rb1P13405 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rb1P13405 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Gm43173-201ENSMUST00000202246 593 ntBASIC20.18■□□□□ 0.82
Rb1P13405 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.18■□□□□ 0.82
Rb1P13405 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rb1P13405 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Rb1P13405 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.17■□□□□ 0.82
Rb1P13405 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms