Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cntn1P12960 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cntn1P12960 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.19■□□□□ 0.66
Cntn1P12960 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Cntn1P12960 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntn1P12960 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cntn1P12960 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntn1P12960 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.18■□□□□ 0.66
Cntn1P12960 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.18■□□□□ 0.66
Cntn1P12960 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.18■□□□□ 0.66
Cntn1P12960 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.18■□□□□ 0.66
Cntn1P12960 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntn1P12960 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.18■□□□□ 0.66
Cntn1P12960 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Cntn1P12960 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cntn1P12960 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cntn1P12960 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Cntn1P12960 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Gm43173-201ENSMUST00000202246 593 ntBASIC19.17■□□□□ 0.66
Cntn1P12960 Spcs1-204ENSMUST00000226782 949 ntBASIC19.17■□□□□ 0.66
Cntn1P12960 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.17■□□□□ 0.66
Cntn1P12960 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntn1P12960 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cntn1P12960 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntn1P12960 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Cntn1P12960 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.15■□□□□ 0.66
Cntn1P12960 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.15■□□□□ 0.66
Cntn1P12960 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.15■□□□□ 0.66
Cntn1P12960 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntn1P12960 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cntn1P12960 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cntn1P12960 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cntn1P12960 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntn1P12960 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cntn1P12960 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntn1P12960 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntn1P12960 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntn1P12960 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cntn1P12960 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Cntn1P12960 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntn1P12960 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntn1P12960 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Cntn1P12960 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.13■□□□□ 0.65
Cntn1P12960 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cntn1P12960 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntn1P12960 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cntn1P12960 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cntn1P12960 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntn1P12960 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.12■□□□□ 0.65
Cntn1P12960 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntn1P12960 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntn1P12960 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cntn1P12960 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cntn1P12960 Mir6236-201ENSMUST00000184437 123 ntBASIC19.12■□□□□ 0.65
Cntn1P12960 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.12■□□□□ 0.65
Cntn1P12960 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cntn1P12960 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntn1P12960 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cntn1P12960 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.12■□□□□ 0.65
Cntn1P12960 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntn1P12960 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntn1P12960 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cntn1P12960 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cntn1P12960 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Cntn1P12960 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms