Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.39■□□□□ 0.38
PtcraP0C6B2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PtcraP0C6B2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Notumos-201ENSMUST00000151998 2659 ntBASIC17.38■□□□□ 0.37
PtcraP0C6B2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.38■□□□□ 0.37
PtcraP0C6B2 Gm13241-201ENSMUST00000094493 780 ntBASIC17.38■□□□□ 0.37
PtcraP0C6B2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PtcraP0C6B2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PtcraP0C6B2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.36■□□□□ 0.37
PtcraP0C6B2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PtcraP0C6B2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PtcraP0C6B2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.34■□□□□ 0.37
PtcraP0C6B2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PtcraP0C6B2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PtcraP0C6B2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PtcraP0C6B2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PtcraP0C6B2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PtcraP0C6B2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.33■□□□□ 0.36
PtcraP0C6B2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PtcraP0C6B2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtcraP0C6B2 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.32■□□□□ 0.36
PtcraP0C6B2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtcraP0C6B2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtcraP0C6B2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtcraP0C6B2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PtcraP0C6B2 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.31■□□□□ 0.36
PtcraP0C6B2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtcraP0C6B2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PtcraP0C6B2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms