Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PdgfrbP05622 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrbP05622 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PdgfrbP05622 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrbP05622 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PdgfrbP05622 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PdgfrbP05622 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
PdgfrbP05622 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrbP05622 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PdgfrbP05622 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.23■□□□□ 0.83
PdgfrbP05622 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.23■□□□□ 0.83
PdgfrbP05622 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.23■□□□□ 0.83
PdgfrbP05622 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.23■□□□□ 0.83
PdgfrbP05622 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.23■□□□□ 0.83
PdgfrbP05622 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrbP05622 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PdgfrbP05622 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PdgfrbP05622 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PdgfrbP05622 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PdgfrbP05622 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PdgfrbP05622 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrbP05622 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PdgfrbP05622 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfrbP05622 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfrbP05622 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PdgfrbP05622 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.21■□□□□ 0.83
PdgfrbP05622 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PdgfrbP05622 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PdgfrbP05622 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfrbP05622 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfrbP05622 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrbP05622 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrbP05622 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrbP05622 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PdgfrbP05622 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PdgfrbP05622 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PdgfrbP05622 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrbP05622 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.18■□□□□ 0.82
PdgfrbP05622 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrbP05622 Golgb1-201ENSMUST00000023534 498 ntBASIC20.18■□□□□ 0.82
PdgfrbP05622 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrbP05622 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PdgfrbP05622 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrbP05622 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrbP05622 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrbP05622 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrbP05622 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.17■□□□□ 0.82
PdgfrbP05622 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PdgfrbP05622 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrbP05622 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrbP05622 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PdgfrbP05622 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrbP05622 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.17■□□□□ 0.82
PdgfrbP05622 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.16■□□□□ 0.82
PdgfrbP05622 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.16■□□□□ 0.82
PdgfrbP05622 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.16■□□□□ 0.82
PdgfrbP05622 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrbP05622 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PdgfrbP05622 Gm12922-201ENSMUST00000120626 809 ntBASIC20.15■□□□□ 0.82
PdgfrbP05622 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.15■□□□□ 0.82
PdgfrbP05622 Mir6236-201ENSMUST00000184437 123 ntBASIC20.15■□□□□ 0.82
PdgfrbP05622 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms