Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Krt1P04104 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.93■□□□□ 0.62
Krt1P04104 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Krt1P04104 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt1P04104 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Krt1P04104 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt1P04104 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt1P04104 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Krt1P04104 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Krt1P04104 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.92■□□□□ 0.62
Krt1P04104 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt1P04104 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt1P04104 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Krt1P04104 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Krt1P04104 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.91■□□□□ 0.62
Krt1P04104 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt1P04104 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt1P04104 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt1P04104 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Krt1P04104 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Krt1P04104 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt1P04104 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Krt1P04104 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt1P04104 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Krt1P04104 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.9■□□□□ 0.62
Krt1P04104 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.9■□□□□ 0.62
Krt1P04104 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt1P04104 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt1P04104 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Krt1P04104 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt1P04104 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Krt1P04104 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt1P04104 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt1P04104 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt1P04104 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Krt1P04104 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt1P04104 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Krt1P04104 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt1P04104 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.88■□□□□ 0.61
Krt1P04104 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Krt1P04104 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Krt1P04104 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt1P04104 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.88■□□□□ 0.61
Krt1P04104 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krt1P04104 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Krt1P04104 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Krt1P04104 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.86■□□□□ 0.61
Krt1P04104 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Krt1P04104 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt1P04104 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt1P04104 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Krt1P04104 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Krt1P04104 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.85■□□□□ 0.61
Krt1P04104 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Gm7432-201ENSMUST00000210343 879 ntBASIC18.85■□□□□ 0.61
Krt1P04104 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Krt1P04104 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Krt1P04104 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt1P04104 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt1P04104 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt1P04104 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt1P04104 Gm11599-201ENSMUST00000118720 878 ntBASIC18.84■□□□□ 0.61
Krt1P04104 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt1P04104 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Krt1P04104 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Krt1P04104 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Krt1P04104 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Krt1P04104 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Krt1P04104 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Krt1P04104 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt1P04104 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms