Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.71■□□□□ 0.27
Hoxa3P02831 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxa3P02831 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxa3P02831 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hoxa3P02831 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxa3P02831 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hoxa3P02831 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxa3P02831 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxa3P02831 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxa3P02831 Gm12251-201ENSMUST00000117893 792 ntBASIC16.7■□□□□ 0.26
Hoxa3P02831 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxa3P02831 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxa3P02831 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxa3P02831 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.69■□□□□ 0.26
Hoxa3P02831 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxa3P02831 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxa3P02831 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxa3P02831 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxa3P02831 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hoxa3P02831 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Hoxa3P02831 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hoxa3P02831 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.68■□□□□ 0.26
Hoxa3P02831 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.68■□□□□ 0.26
Hoxa3P02831 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa3P02831 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Hoxa3P02831 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hoxa3P02831 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Hoxa3P02831 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.67■□□□□ 0.26
Hoxa3P02831 Gm43017-201ENSMUST00000198296 752 ntBASIC16.67■□□□□ 0.26
Hoxa3P02831 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.67■□□□□ 0.26
Hoxa3P02831 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hoxa3P02831 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa3P02831 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.66■□□□□ 0.26
Hoxa3P02831 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hoxa3P02831 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Hoxa3P02831 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa3P02831 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.65■□□□□ 0.26
Hoxa3P02831 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hoxa3P02831 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.65■□□□□ 0.26
Hoxa3P02831 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hoxa3P02831 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.65■□□□□ 0.26
Hoxa3P02831 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.65■□□□□ 0.26
Hoxa3P02831 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa3P02831 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Hoxa3P02831 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hoxa3P02831 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Hoxa3P02831 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.64■□□□□ 0.25
Hoxa3P02831 Gm8493-201ENSMUST00000196881 489 ntBASIC16.64■□□□□ 0.25
Hoxa3P02831 Gm43173-201ENSMUST00000202246 593 ntBASIC16.64■□□□□ 0.25
Hoxa3P02831 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa3P02831 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hoxa3P02831 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxa3P02831 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms