Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CopeO89079 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.64■□□□□ 0.89
CopeO89079 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CopeO89079 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.64■□□□□ 0.89
CopeO89079 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CopeO89079 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CopeO89079 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CopeO89079 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CopeO89079 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopeO89079 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopeO89079 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopeO89079 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopeO89079 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopeO89079 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CopeO89079 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.63■□□□□ 0.89
CopeO89079 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.63■□□□□ 0.89
CopeO89079 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CopeO89079 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.63■□□□□ 0.89
CopeO89079 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CopeO89079 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CopeO89079 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CopeO89079 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CopeO89079 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CopeO89079 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CopeO89079 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CopeO89079 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.6■□□□□ 0.89
CopeO89079 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CopeO89079 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CopeO89079 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CopeO89079 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CopeO89079 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.59■□□□□ 0.89
CopeO89079 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CopeO89079 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopeO89079 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CopeO89079 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopeO89079 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopeO89079 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CopeO89079 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.58■□□□□ 0.89
CopeO89079 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CopeO89079 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.58■□□□□ 0.88
CopeO89079 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CopeO89079 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CopeO89079 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.58■□□□□ 0.88
CopeO89079 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopeO89079 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopeO89079 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.57■□□□□ 0.88
CopeO89079 Gm10399-202ENSMUST00000202768 748 ntBASIC20.57■□□□□ 0.88
CopeO89079 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.57■□□□□ 0.88
CopeO89079 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.57■□□□□ 0.88
CopeO89079 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopeO89079 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CopeO89079 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CopeO89079 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CopeO89079 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.56■□□□□ 0.88
CopeO89079 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopeO89079 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopeO89079 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopeO89079 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CopeO89079 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CopeO89079 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CopeO89079 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CopeO89079 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CopeO89079 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.55■□□□□ 0.88
CopeO89079 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CopeO89079 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CopeO89079 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CopeO89079 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.55■□□□□ 0.88
CopeO89079 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms