Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn1O88704 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hcn1O88704 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn1O88704 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hcn1O88704 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.05■□□□□ 0.64
Hcn1O88704 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.05■□□□□ 0.64
Hcn1O88704 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn1O88704 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Hcn1O88704 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn1O88704 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn1O88704 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn1O88704 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hcn1O88704 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.04■□□□□ 0.64
Hcn1O88704 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hcn1O88704 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hcn1O88704 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Hcn1O88704 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hcn1O88704 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn1O88704 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn1O88704 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn1O88704 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn1O88704 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcn1O88704 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn1O88704 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn1O88704 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn1O88704 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn1O88704 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcn1O88704 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.02■□□□□ 0.64
Hcn1O88704 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.02■□□□□ 0.64
Hcn1O88704 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hcn1O88704 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hcn1O88704 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hcn1O88704 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hcn1O88704 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.01■□□□□ 0.63
Hcn1O88704 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.01■□□□□ 0.63
Hcn1O88704 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Hcn1O88704 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.01■□□□□ 0.63
Hcn1O88704 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcn1O88704 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Gm43545-201ENSMUST00000196765 2779 ntBASIC19■□□□□ 0.63
Hcn1O88704 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hcn1O88704 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19■□□□□ 0.63
Hcn1O88704 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hcn1O88704 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn1O88704 Gm12922-201ENSMUST00000120626 809 ntBASIC18.99■□□□□ 0.63
Hcn1O88704 Gm9847-201ENSMUST00000052528 599 ntBASIC18.99■□□□□ 0.63
Hcn1O88704 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn1O88704 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Hcn1O88704 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hcn1O88704 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn1O88704 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn1O88704 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn1O88704 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcn1O88704 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.99■□□□□ 0.63
Hcn1O88704 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Hcn1O88704 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hcn1O88704 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn1O88704 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn1O88704 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn1O88704 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hcn1O88704 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Hcn1O88704 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn1O88704 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcn1O88704 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hcn1O88704 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hcn1O88704 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Hcn1O88704 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.97■□□□□ 0.63
Hcn1O88704 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hcn1O88704 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcn1O88704 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hcn1O88704 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.96■□□□□ 0.63
Hcn1O88704 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms