Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.69■□□□□ 0.9
Shoc2O88520 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shoc2O88520 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shoc2O88520 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shoc2O88520 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shoc2O88520 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shoc2O88520 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shoc2O88520 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Shoc2O88520 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.67■□□□□ 0.9
Shoc2O88520 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shoc2O88520 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.67■□□□□ 0.9
Shoc2O88520 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shoc2O88520 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shoc2O88520 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shoc2O88520 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Shoc2O88520 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Shoc2O88520 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.66■□□□□ 0.9
Shoc2O88520 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.66■□□□□ 0.9
Shoc2O88520 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.66■□□□□ 0.9
Shoc2O88520 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shoc2O88520 Gm9870-201ENSMUST00000063874 645 ntBASIC20.66■□□□□ 0.9
Shoc2O88520 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shoc2O88520 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.66■□□□□ 0.9
Shoc2O88520 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Shoc2O88520 Gm7143-201ENSMUST00000222811 859 ntBASIC20.65■□□□□ 0.9
Shoc2O88520 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.65■□□□□ 0.9
Shoc2O88520 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Shoc2O88520 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shoc2O88520 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shoc2O88520 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shoc2O88520 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shoc2O88520 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shoc2O88520 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Shoc2O88520 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shoc2O88520 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Shoc2O88520 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shoc2O88520 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shoc2O88520 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.63■□□□□ 0.89
Shoc2O88520 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Shoc2O88520 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
Shoc2O88520 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Shoc2O88520 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.63■□□□□ 0.89
Shoc2O88520 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shoc2O88520 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.63■□□□□ 0.89
Shoc2O88520 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Shoc2O88520 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shoc2O88520 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shoc2O88520 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shoc2O88520 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shoc2O88520 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shoc2O88520 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Shoc2O88520 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shoc2O88520 Golph3-202ENSMUST00000226517 2359 ntBASIC20.61■□□□□ 0.89
Shoc2O88520 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shoc2O88520 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Shoc2O88520 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Shoc2O88520 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shoc2O88520 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shoc2O88520 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shoc2O88520 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shoc2O88520 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shoc2O88520 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Shoc2O88520 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shoc2O88520 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shoc2O88520 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Shoc2O88520 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shoc2O88520 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shoc2O88520 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shoc2O88520 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.58■□□□□ 0.89
Shoc2O88520 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms