Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.28■□□□□ 0.68
Dnmt3bO88509 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3bO88509 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3bO88509 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3bO88509 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3bO88509 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dnmt3bO88509 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Dnmt3bO88509 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3bO88509 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3bO88509 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3bO88509 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3bO88509 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.27■□□□□ 0.68
Dnmt3bO88509 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.27■□□□□ 0.68
Dnmt3bO88509 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dnmt3bO88509 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.27■□□□□ 0.67
Dnmt3bO88509 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Dnmt3bO88509 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Dnmt3bO88509 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.26■□□□□ 0.67
Dnmt3bO88509 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.26■□□□□ 0.67
Dnmt3bO88509 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.25■□□□□ 0.67
Dnmt3bO88509 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3bO88509 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3bO88509 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.24■□□□□ 0.67
Dnmt3bO88509 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3bO88509 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3bO88509 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.24■□□□□ 0.67
Dnmt3bO88509 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3bO88509 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Dnmt3bO88509 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Dnmt3bO88509 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3bO88509 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3bO88509 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Gm12922-201ENSMUST00000120626 809 ntBASIC19.22■□□□□ 0.67
Dnmt3bO88509 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.22■□□□□ 0.67
Dnmt3bO88509 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.22■□□□□ 0.67
Dnmt3bO88509 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3bO88509 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.21■□□□□ 0.67
Dnmt3bO88509 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3bO88509 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3bO88509 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3bO88509 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3bO88509 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3bO88509 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3bO88509 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.19■□□□□ 0.66
Dnmt3bO88509 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3bO88509 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3bO88509 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms