Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1bO88384 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1bO88384 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1bO88384 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1bO88384 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vti1bO88384 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vti1bO88384 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Vti1bO88384 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vti1bO88384 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vti1bO88384 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.97■□□□□ 0.63
Vti1bO88384 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.97■□□□□ 0.63
Vti1bO88384 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.97■□□□□ 0.63
Vti1bO88384 Gm9959-201ENSMUST00000068277 390 ntBASIC18.97■□□□□ 0.63
Vti1bO88384 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.97■□□□□ 0.63
Vti1bO88384 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vti1bO88384 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.96■□□□□ 0.63
Vti1bO88384 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1bO88384 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vti1bO88384 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1bO88384 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vti1bO88384 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1bO88384 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1bO88384 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vti1bO88384 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1bO88384 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vti1bO88384 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.95■□□□□ 0.62
Vti1bO88384 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1bO88384 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Vti1bO88384 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1bO88384 Etf1-202ENSMUST00000180351 108 ntBASIC18.95■□□□□ 0.62
Vti1bO88384 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.95■□□□□ 0.62
Vti1bO88384 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1bO88384 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Vti1bO88384 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vti1bO88384 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.94■□□□□ 0.62
Vti1bO88384 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1bO88384 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.94■□□□□ 0.62
Vti1bO88384 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vti1bO88384 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vti1bO88384 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vti1bO88384 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Vti1bO88384 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.93■□□□□ 0.62
Vti1bO88384 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Gm45102-201ENSMUST00000207427 857 ntBASIC18.93■□□□□ 0.62
Vti1bO88384 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vti1bO88384 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vti1bO88384 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.92■□□□□ 0.62
Vti1bO88384 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1bO88384 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vti1bO88384 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vti1bO88384 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1bO88384 Gm7417-201ENSMUST00000192950 473 ntBASIC18.92■□□□□ 0.62
Vti1bO88384 Rps24-207ENSMUST00000224568 714 ntBASIC18.92■□□□□ 0.62
Vti1bO88384 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1bO88384 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vti1bO88384 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.92■□□□□ 0.62
Vti1bO88384 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1bO88384 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vti1bO88384 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vti1bO88384 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vti1bO88384 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.91■□□□□ 0.62
Vti1bO88384 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vti1bO88384 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vti1bO88384 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1bO88384 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.9■□□□□ 0.62
Vti1bO88384 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vti1bO88384 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms