Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.81■□□□□ 0.44
SgceO70258 Gm14117-201ENSMUST00000122417 843 ntBASIC17.81■□□□□ 0.44
SgceO70258 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgceO70258 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SgceO70258 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgceO70258 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgceO70258 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.8■□□□□ 0.44
SgceO70258 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgceO70258 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SgceO70258 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Gm22238-201ENSMUST00000175222 88 ntBASIC17.79■□□□□ 0.44
SgceO70258 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.79■□□□□ 0.44
SgceO70258 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgceO70258 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SgceO70258 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.78■□□□□ 0.44
SgceO70258 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
SgceO70258 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.78■□□□□ 0.44
SgceO70258 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.78■□□□□ 0.44
SgceO70258 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SgceO70258 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgceO70258 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgceO70258 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.77■□□□□ 0.44
SgceO70258 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgceO70258 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SgceO70258 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgceO70258 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SgceO70258 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.77■□□□□ 0.44
SgceO70258 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgceO70258 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SgceO70258 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgceO70258 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.77■□□□□ 0.43
SgceO70258 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgceO70258 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgceO70258 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SgceO70258 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SgceO70258 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgceO70258 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.75■□□□□ 0.43
SgceO70258 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.75■□□□□ 0.43
SgceO70258 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.75■□□□□ 0.43
SgceO70258 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SgceO70258 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SgceO70258 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SgceO70258 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgceO70258 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.74■□□□□ 0.43
SgceO70258 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
SgceO70258 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.74■□□□□ 0.43
SgceO70258 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SgceO70258 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgceO70258 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.74■□□□□ 0.43
SgceO70258 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgceO70258 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgceO70258 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SgceO70258 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgceO70258 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SgceO70258 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.73■□□□□ 0.43
SgceO70258 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgceO70258 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgceO70258 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgceO70258 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgceO70258 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgceO70258 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgceO70258 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SgceO70258 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SgceO70258 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SgceO70258 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
SgceO70258 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms