Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.96■□□□□ 0.63
Rdh5O55240 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rdh5O55240 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh5O55240 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rdh5O55240 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rdh5O55240 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh5O55240 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rdh5O55240 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh5O55240 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.95■□□□□ 0.62
Rdh5O55240 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.95■□□□□ 0.62
Rdh5O55240 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.95■□□□□ 0.62
Rdh5O55240 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh5O55240 Gm9847-201ENSMUST00000052528 599 ntBASIC18.95■□□□□ 0.62
Rdh5O55240 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh5O55240 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh5O55240 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rdh5O55240 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rdh5O55240 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh5O55240 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.93■□□□□ 0.62
Rdh5O55240 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Rdh5O55240 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Rdh5O55240 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh5O55240 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rdh5O55240 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.92■□□□□ 0.62
Rdh5O55240 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rdh5O55240 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rdh5O55240 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.92■□□□□ 0.62
Rdh5O55240 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh5O55240 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rdh5O55240 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.91■□□□□ 0.62
Rdh5O55240 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rdh5O55240 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh5O55240 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rdh5O55240 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh5O55240 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.9■□□□□ 0.62
Rdh5O55240 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh5O55240 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.9■□□□□ 0.62
Rdh5O55240 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh5O55240 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh5O55240 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rdh5O55240 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh5O55240 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh5O55240 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rdh5O55240 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rdh5O55240 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh5O55240 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh5O55240 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.89■□□□□ 0.61
Rdh5O55240 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh5O55240 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.89■□□□□ 0.61
Rdh5O55240 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh5O55240 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh5O55240 Gm12922-201ENSMUST00000120626 809 ntBASIC18.88■□□□□ 0.61
Rdh5O55240 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh5O55240 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh5O55240 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.88■□□□□ 0.61
Rdh5O55240 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 137.7 ms