Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh12O55134 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh12O55134 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh12O55134 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Pcdh12O55134 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.11■□□□□ 0.49
Pcdh12O55134 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdh12O55134 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh12O55134 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh12O55134 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh12O55134 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh12O55134 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.1■□□□□ 0.49
Pcdh12O55134 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh12O55134 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh12O55134 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh12O55134 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh12O55134 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Pcdh12O55134 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh12O55134 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Pcdh12O55134 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh12O55134 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh12O55134 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh12O55134 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh12O55134 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh12O55134 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh12O55134 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh12O55134 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pcdh12O55134 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdh12O55134 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh12O55134 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdh12O55134 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh12O55134 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh12O55134 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdh12O55134 Gm21956-201ENSMUST00000179946 522 ntBASIC18.06■□□□□ 0.48
Pcdh12O55134 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh12O55134 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdh12O55134 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.05■□□□□ 0.48
Pcdh12O55134 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh12O55134 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdh12O55134 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh12O55134 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh12O55134 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh12O55134 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh12O55134 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh12O55134 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms