Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11aO35305 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11aO35305 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11aO35305 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11aO35305 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11aO35305 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11aO35305 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf11aO35305 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.66■■□□□ 1.06
Tnfrsf11aO35305 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.66■■□□□ 1.06
Tnfrsf11aO35305 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf11aO35305 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf11aO35305 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Gm13241-201ENSMUST00000094493 780 ntBASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11aO35305 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tnfrsf11aO35305 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.64■■□□□ 1.06
Tnfrsf11aO35305 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Tnfrsf11aO35305 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11aO35305 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11aO35305 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Tnfrsf11aO35305 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11aO35305 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11aO35305 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Mir6236-201ENSMUST00000184437 123 ntBASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Tnfrsf11aO35305 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.62■■□□□ 1.05
Tnfrsf11aO35305 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11aO35305 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11aO35305 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Tnfrsf11aO35305 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11aO35305 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11aO35305 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11aO35305 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11aO35305 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11aO35305 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Tnfrsf11aO35305 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11aO35305 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11aO35305 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11aO35305 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11aO35305 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Tnfrsf11aO35305 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11aO35305 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11aO35305 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms