Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trove2O08848 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Trove2O08848 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trove2O08848 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.41■□□□□ 0.86
Trove2O08848 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trove2O08848 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.41■□□□□ 0.86
Trove2O08848 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trove2O08848 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.4■□□□□ 0.86
Trove2O08848 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trove2O08848 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trove2O08848 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trove2O08848 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.4■□□□□ 0.86
Trove2O08848 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trove2O08848 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trove2O08848 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trove2O08848 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.39■□□□□ 0.86
Trove2O08848 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.39■□□□□ 0.86
Trove2O08848 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trove2O08848 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Trove2O08848 Gm43566-201ENSMUST00000196851 808 ntBASIC20.39■□□□□ 0.85
Trove2O08848 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.39■□□□□ 0.85
Trove2O08848 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trove2O08848 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trove2O08848 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trove2O08848 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trove2O08848 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trove2O08848 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trove2O08848 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trove2O08848 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trove2O08848 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trove2O08848 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.37■□□□□ 0.85
Trove2O08848 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trove2O08848 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trove2O08848 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trove2O08848 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trove2O08848 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trove2O08848 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.36■□□□□ 0.85
Trove2O08848 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trove2O08848 Gm13238-201ENSMUST00000117655 780 ntBASIC20.35■□□□□ 0.85
Trove2O08848 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Trove2O08848 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trove2O08848 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trove2O08848 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trove2O08848 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.34■□□□□ 0.85
Trove2O08848 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trove2O08848 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.34■□□□□ 0.85
Trove2O08848 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trove2O08848 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.34■□□□□ 0.85
Trove2O08848 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trove2O08848 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.34■□□□□ 0.85
Trove2O08848 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trove2O08848 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Trove2O08848 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trove2O08848 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trove2O08848 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trove2O08848 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trove2O08848 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trove2O08848 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.33■□□□□ 0.85
Trove2O08848 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trove2O08848 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trove2O08848 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trove2O08848 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Trove2O08848 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trove2O08848 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms