Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Polr2jO08740 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.22■□□□□ 0.67
Polr2jO08740 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.22■□□□□ 0.67
Polr2jO08740 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.22■□□□□ 0.67
Polr2jO08740 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Polr2jO08740 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr2jO08740 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr2jO08740 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr2jO08740 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr2jO08740 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Polr2jO08740 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.21■□□□□ 0.67
Polr2jO08740 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Polr2jO08740 Gm10399-202ENSMUST00000202768 748 ntBASIC19.21■□□□□ 0.67
Polr2jO08740 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Polr2jO08740 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Polr2jO08740 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Polr2jO08740 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Polr2jO08740 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Polr2jO08740 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Polr2jO08740 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr2jO08740 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr2jO08740 Gm13238-201ENSMUST00000117655 780 ntBASIC19.2■□□□□ 0.66
Polr2jO08740 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Polr2jO08740 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Polr2jO08740 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr2jO08740 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Polr2jO08740 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
Polr2jO08740 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr2jO08740 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Polr2jO08740 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.19■□□□□ 0.66
Polr2jO08740 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Polr2jO08740 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Polr2jO08740 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Polr2jO08740 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr2jO08740 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr2jO08740 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Polr2jO08740 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Polr2jO08740 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr2jO08740 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.18■□□□□ 0.66
Polr2jO08740 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.18■□□□□ 0.66
Polr2jO08740 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr2jO08740 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Polr2jO08740 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.17■□□□□ 0.66
Polr2jO08740 Gm43566-201ENSMUST00000196851 808 ntBASIC19.17■□□□□ 0.66
Polr2jO08740 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Polr2jO08740 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr2jO08740 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2jO08740 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2jO08740 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2jO08740 Cap2-205ENSMUST00000225824 1634 ntBASIC19.16■□□□□ 0.66
Polr2jO08740 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.16■□□□□ 0.66
Polr2jO08740 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.16■□□□□ 0.66
Polr2jO08740 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.16■□□□□ 0.66
Polr2jO08740 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2jO08740 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2jO08740 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2jO08740 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2jO08740 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2jO08740 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2jO08740 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2jO08740 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.15■□□□□ 0.66
Polr2jO08740 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr2jO08740 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr2jO08740 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr2jO08740 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr2jO08740 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Polr2jO08740 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2jO08740 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2jO08740 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Polr2jO08740 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2jO08740 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2jO08740 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.13■□□□□ 0.65
Polr2jO08740 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2jO08740 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.13■□□□□ 0.65
Polr2jO08740 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2jO08740 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2jO08740 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Polr2jO08740 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2jO08740 Gm5921-201ENSMUST00000075898 882 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms