Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh9F8VPK8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh9F8VPK8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh9F8VPK8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh9F8VPK8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh9F8VPK8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh9F8VPK8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh9F8VPK8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh9F8VPK8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdh9F8VPK8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh9F8VPK8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh9F8VPK8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh9F8VPK8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh9F8VPK8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh9F8VPK8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh9F8VPK8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh9F8VPK8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh9F8VPK8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh9F8VPK8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh9F8VPK8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh9F8VPK8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh9F8VPK8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh9F8VPK8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh9F8VPK8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.45■□□□□ 0.86
Pcdh9F8VPK8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms