Protein–RNA interactions for Protein: F7CWA7

Gm11009, Predicted gene 11009 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11009F7CWA7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11009F7CWA7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11009F7CWA7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm11009F7CWA7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11009F7CWA7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11009F7CWA7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11009F7CWA7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm11009F7CWA7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm11009F7CWA7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11009F7CWA7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11009F7CWA7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm11009F7CWA7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm11009F7CWA7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm11009F7CWA7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm11009F7CWA7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms