Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
Zc3h13E9Q784 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Zc3h13E9Q784 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Zc3h13E9Q784 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Zc3h13E9Q784 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Zc3h13E9Q784 Gm42555-201ENSMUST00000199304 1039 ntBASIC28.26■■■□□ 2.12
Zc3h13E9Q784 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
Zc3h13E9Q784 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Zc3h13E9Q784 Gm43403-201ENSMUST00000198011 1786 ntBASIC28.26■■■□□ 2.11
Zc3h13E9Q784 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Zc3h13E9Q784 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Zc3h13E9Q784 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Zc3h13E9Q784 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Zc3h13E9Q784 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC28.25■■■□□ 2.11
Zc3h13E9Q784 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Zc3h13E9Q784 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Zc3h13E9Q784 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Zc3h13E9Q784 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Zc3h13E9Q784 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Reep4-203ENSMUST00000226563 1444 ntBASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Zc3h13E9Q784 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Gm9988-201ENSMUST00000069786 435 ntBASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Zc3h13E9Q784 AC130671.1-201ENSMUST00000227384 1237 ntBASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Mir6236-201ENSMUST00000184437 123 ntBASIC28.21■■■□□ 2.11
Zc3h13E9Q784 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Zc3h13E9Q784 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Zc3h13E9Q784 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Zc3h13E9Q784 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Zc3h13E9Q784 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Zc3h13E9Q784 Gm43859-201ENSMUST00000200075 1412 ntBASIC28.19■■■□□ 2.1
Zc3h13E9Q784 Gm13148-201ENSMUST00000118892 745 ntBASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Gm13168-201ENSMUST00000121771 632 ntBASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Gm29241-201ENSMUST00000189260 1096 ntBASIC28.18■■■□□ 2.1
Zc3h13E9Q784 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Zc3h13E9Q784 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC28.17■■■□□ 2.1
Zc3h13E9Q784 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Zc3h13E9Q784 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Zc3h13E9Q784 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Zc3h13E9Q784 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Zc3h13E9Q784 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
Zc3h13E9Q784 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Zc3h13E9Q784 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC28.15■■■□□ 2.1
Zc3h13E9Q784 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Zc3h13E9Q784 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Zc3h13E9Q784 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Zc3h13E9Q784 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Zc3h13E9Q784 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Zc3h13E9Q784 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Zc3h13E9Q784 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC28.13■■■□□ 2.09
Zc3h13E9Q784 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Zc3h13E9Q784 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Zc3h13E9Q784 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC28.12■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms