Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdr1E9Q0B4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdr1E9Q0B4 Gm8503-201ENSMUST00000118131 455 ntBASIC19.73■□□□□ 0.75
Cdr1E9Q0B4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdr1E9Q0B4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdr1E9Q0B4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cdr1E9Q0B4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdr1E9Q0B4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdr1E9Q0B4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdr1E9Q0B4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdr1E9Q0B4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdr1E9Q0B4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdr1E9Q0B4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdr1E9Q0B4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdr1E9Q0B4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdr1E9Q0B4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdr1E9Q0B4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 Gm7432-201ENSMUST00000210343 879 ntBASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdr1E9Q0B4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdr1E9Q0B4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Gm11599-201ENSMUST00000118720 878 ntBASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
Cdr1E9Q0B4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Cdr1E9Q0B4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdr1E9Q0B4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdr1E9Q0B4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdr1E9Q0B4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms