Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Gm4950D3YUM8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm4950D3YUM8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm4950D3YUM8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4950D3YUM8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm4950D3YUM8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm4950D3YUM8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm4950D3YUM8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm4950D3YUM8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm4950D3YUM8 Gm7143-201ENSMUST00000222811 859 ntBASIC17.04■□□□□ 0.32
Gm4950D3YUM8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Gm4950D3YUM8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm4950D3YUM8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm4950D3YUM8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.02■□□□□ 0.32
Gm4950D3YUM8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm4950D3YUM8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm4950D3YUM8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm4950D3YUM8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm4950D3YUM8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm4950D3YUM8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm4950D3YUM8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm4950D3YUM8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm4950D3YUM8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm4950D3YUM8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm4950D3YUM8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm4950D3YUM8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms