Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd4B9EKX1 Gm42642-201ENSMUST00000200683 355 ntBASIC21.66■■□□□ 1.06
Ptchd4B9EKX1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd4B9EKX1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd4B9EKX1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd4B9EKX1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 Gm7291-201ENSMUST00000199147 382 ntBASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.65■■□□□ 1.06
Ptchd4B9EKX1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.64■■□□□ 1.06
Ptchd4B9EKX1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptchd4B9EKX1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Ptchd4B9EKX1 Gm10849-201ENSMUST00000100397 618 ntBASIC21.64■■□□□ 1.05
Ptchd4B9EKX1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptchd4B9EKX1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.64■■□□□ 1.05
Ptchd4B9EKX1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptchd4B9EKX1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptchd4B9EKX1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptchd4B9EKX1 Gm42569-201ENSMUST00000200539 472 ntBASIC21.63■■□□□ 1.05
Ptchd4B9EKX1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptchd4B9EKX1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ptchd4B9EKX1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Gm27405-201ENSMUST00000184201 112 ntBASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd4B9EKX1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ptchd4B9EKX1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.59■■□□□ 1.05
Ptchd4B9EKX1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd4B9EKX1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptchd4B9EKX1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptchd4B9EKX1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Gm29257-201ENSMUST00000186115 639 ntBASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd4B9EKX1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd4B9EKX1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Gm10033-202ENSMUST00000211874 928 ntBASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd4B9EKX1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms